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Accurate Expression Profiling of Very Small Cell Populations. Gonzalez-Roca E, Garcia-Albéniz X, Rodriguez-Mulero S, Gomis RR, Kornacker K, Auer H. PLoS ONE, 2010; 5: e14418. Download
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Understanding the complete picture of genomic variation. Auer H Listen to the podcast
Cómo se ‘cocina’ un ser humano. El País Download Español
Expression Profiling Using Affymetrix GeneChip Microarrays. Auer H, Newsom DL, Kornacker K. Methods Mol Biol. 2009;509:35-46. Download
Innate and adaptive immune activation in the brain of MPS IIIB mouse model. DiRosario J, Divers E, Wang C, Etter J, Charrier A, Jukkola P, Auer H, Best V, Newsom DL, McCarty DM, Fu H. J Neurosci Res. 2009;87:978-90.
Drosophila HP1c isoform interacts with the zinc-finger proteins WOC and Relative-of-WOC to regulate gene expression. Font-Burgada J, Rossell D, Auer H, Azorín F. Genes Dev. 2008; 22:3007-23. Download
Expression divergence and copy number variation in the human genome. Auer H. Cytogenet Genome Res. 2008;123:278-82. Download
Transcriptional profiling of the megabladder mouse: a unique model of bladder dysmorphogenesis. Singh S, Robinson M, Ismail I, Saha M, Auer H, Kornacker K, Robinson ML, Bates CM, McHugh KM. Dev Dyn. 2008;237:170-86. Download
HOXB4's road map to stem cell expansion. Schiedlmeier B, Santos AC, Ribeiro A, Moncaut N, Lesinski D, Auer H, Kornacker K, Ostertag W, Baum C, Mallo M, Klump H. Proc Natl Acad Sci U S A. 2007;104:16952-7. Download
Disruption of ZAS3 in mice alters NF-kappaB and AP-1 DNA binding and T-cell development. Allen CE, Richards J, Muthusamy N, Auer H, Liu Y, Robinson ML, Barnard JA, Wu LC. Gene Expr. 2007;14:83-100.
Big results from small samples: evaluation of amplification protocols for gene expression profiling. Viale A, Li J, Tiesman J, Hester S, Massimi A, Griffin C, Grills G, Khitrov G, Lilley K, Knudtson K, Ward B, Kornacker K, Chu CY, Auer H, Brooks AI. J Biomol Tech. 2007;18:150-61. Download
Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays. Auer H, Newsom DL, Nowak NJ, McHugh KM, Singh S, Yu CY, Yang Y, Wenger GD, Gastier-Foster JM, Kornacker K. BMC Genomics. 2007;8:111. Download
Gene expression and functional evidence of epithelial-to-mesenchymal transition in papillary thyroid carcinoma invasion. Vasko V, Espinosa AV, Scouten W, He H, Auer H, Liyanarachchi S, Larin A, Savchenko V, Francis GL, de la Chapelle A, Saji M, Ringel MD. Proc Natl Acad Sci U S A. 2007;104:2803-8. Download
Quantification of DNA methylation in electrofluidics chips (Bio-COBRA). Brena RM, Auer H, Kornacker K, Plass C. Nat Protoc. 2006;1:52-8.
ADOA3R as a therapeutic target in experimental colitis: proof by validated high-density oligonucleotide microarray analysis. Guzman J, Yu JG, Suntres Z, Bozarov A, Cooke H, Javed N, Auer H, Palatini J, Hassanain HH, Cardounel AJ, Javed A, Grants I, Wunderlich JE, Christofi FL. Inflamm Bowel Dis. 2006;12:766-89.
20q11.1 amplification in giant-cell tumor of bone: Array CGH, FISH, and association with outcome. Smith LT, Mayerson J, Nowak NJ, Suster D, Mohammed N, Long S, Auer H, Jones S, McKeegan C, Young G, Bos G, Plass C, Morrison C. Genes Chromosomes Cancer. 2006;45:957-66.
The ABRF MARG microarray survey 2005: taking the pulse of the microarray field. Knudtson KL, Auer H, Brooks AI, Griffin C, Grills G, Hester S, Khitrov G, Lilley KS, Massimi A, Tiesman JP, Viale A. J Biomol Tech. 2006;17:176-86. Download
Accurate quantification of DNA methylation using combined bisulfite restriction analysis coupled with the Agilent 2100 Bioanalyzer platform. Brena RM, Auer H, Kornacker K, Hackanson B, Raval A, Byrd JC, Plass C. Nucleic Acids Res. 2006;34:e17. Download
MYC amplification and polysomy 8 in chondrosarcoma: array comparative genomic hybridization, fluorescent in situ hybridization, and association with outcome. Morrison C, Radmacher M, Mohammed N, Suster D, Auer H, Jones S, Riggenbach J, Kelbick N, Bos G, Mayerson J. J Clin Oncol. 2005;23:9369-76. Download
Role of cancer-associated stromal fibroblasts in metastatic colon cancer to the liver and their expression profiles Nakagawa H, Liyanarachchi S, Davuluri RV, Auer H, Martin EW Jr, de la Chapelle A, Frankel WL. Oncogene 2004;23:7366-77. Download
Acute myeloid leukemia with complex karyotypes and abnormal chromosome 21: Amplification discloses overexpression of APP, ETS2, and ERG genes. Baldus CD, Liyanarachchi S, Mrozek K, Auer H, Tanner SM, Guimond M, Ruppert AS, Mohamed N, Davuluri RV, Caligiuri MA, Bloomfield CD, de la Chapelle A. Proc.Natl.Acad.Sci.USA 2004;101:3915-20. Download
Tissue-wide expression profiling using cDNA Subtraction and Microarrays to identify tumor-specific genes. Amatschek S, Koenig U, Auer H, Steinlein P, Pacher M, Gruenfelder A, Dekan G, Vogl S, Kubista E, Heider KH, Stratowa C, Schreiber M, Sommergruber W. Cancer Res. 2004;64:844-56. Download
Bone morphogenic protein 3B silencing in non-small-cell lung cancer. Dai Z, Popkie AP, Zhu W, Timmers CD, Raval A, Tannehill-Gregg S, Morrison CD, Auer H, Kratzke RA, Rosol T, Otterson GA, Plass C. Oncogene 2004;23:3521-29. Download
Chipping away at the chip bias: RNA degradation in microarray analysis. Auer H, Liyanarachchi S, Newsom D, Klisovic MI, Marcucci G, Kornacker K. Nat.Genet. 2003;35:292-3. Download
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